STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5166TIGRFAM: conserved hypothetical protein; COGs: COG4370 conserved hypothetical protein; InterPro IPR019994; KEGG: npu:Npun_R1454 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved hypothetical protein. (466 aa)    
Predicted Functional Partners:
Chro_1639
Putative lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; KEGG: npu:Npun_F3759 putative lipid-A-disaccharide synthase; SPTR: Putative lipid-A-disaccharide synthase.
 
     0.788
Chro_3113
PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: ava:Ava_1637 permease YjgP/YjgQ; PFAM: permease YjgP/YjgQ family protein; SPTR: Permease YjgP/YjgQ.
 
     0.726
Chro_1529
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: npu:Npun_R4574 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
  
     0.723
Chro_1438
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049:IPR018247; KEGG: npu:Npun_F4220 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
  
     0.702
Chro_5279
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: npu:Npun_R4574 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
  
     0.684
Chro_2267
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: chloroplast envelope protein translocase, IAP75 family; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR010827:IPR013686:IPR000184; KEGG: npu:Npun_F2928 surface antigen (D15); PFAM: surface antigen (D15); surface antigen variable number repeat-containing protein; Polypeptide-transport-associated domain protein ShlB-type; SPTR: Surface antigen (D15).
 
     0.680
Chro_1819
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: npu:Npun_R4574 carbohydrate-selective porin OprB; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: Carbohydrate-selective porin OprB; TC 1.B.23; Belongs to the OprB family.
  
     0.666
Chro_0406
PFAM: Carbohydrate-selective porin, OprB family; S-layer homology domain; InterPro IPR001119:IPR007049; KEGG: ava:Ava_4440 S-layer region-like; PFAM: Carbohydrate-selective porin OprB; S-layer domain-containing protein; SPTR: S-layer region-like protein; TC 1.B.23; Belongs to the OprB family.
  
     0.663
Chro_1282
Hypothetical protein; InterPro IPR017260; KEGG: ana:all4101 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.657
Chro_2937
PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: ana:all3908 hypothetical protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: All3908 protein.
  
     0.657
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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