STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5178PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR001484:IPR010105; KEGG: ana:alr2175 ferrichrome iron receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Ferrichrome iron receptor; TIGRFAM: TonB-dependent siderophore receptor. (860 aa)    
Predicted Functional Partners:
Chro_1862
Propeptide PepSY amd peptidase M4; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005075; KEGG: npu:Npun_F3453 peptidase; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Propeptide, PepSY amd peptidase M4.
 
  
 0.667
Chro_5177
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR020449:IPR000005:IPR018062:IPR018060; KEGG: gvi:gll0335 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulatory protein.
 
     0.660
Chro_2452
Peptidase; COGs: COG3182 Uncharacterized iron-regulated membrane protein; KEGG: npu:Npun_F3453 peptidase; SPTR: Propeptide, PepSY amd peptidase M4.
 
  
 0.657
Chro_2884
Peptidase; COGs: COG3182 Uncharacterized iron-regulated membrane protein; KEGG: npu:Npun_F3453 peptidase; SPTR: Propeptide, PepSY amd peptidase M4.
 
  
 0.640
Chro_1888
Propeptide PepSY amd peptidase M4; PFAM: Peptidase propeptide and YPEB domain; COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005075; KEGG: npu:Npun_F3453 peptidase; PFAM: Propeptide PepSY amd peptidase M4; SPTR: Propeptide, PepSY amd peptidase M4.
 
  
 0.618
Chro_1892
Outer membrane transport energization protein TonB; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: ana:all5036 hypothetical protein; PFAM: TonB domain; SPTR: All5036 protein; TIGRFAM: TonB family protein; TC 2.C.1.1.1.
  
 
 0.583
Chro_5175
Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR020449:IPR000005:IPR018060; KEGG: gvi:gll0335 AraC family transcription regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: AraC family transcriptional regulatory protein.
 
     0.526
argJ
N-acetylglutamate synthase, glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.
       0.523
Chro_3274
PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3128 Uncharacterized iron-regulated protein; InterPro IPR005123:IPR006620; KEGG: cyb:CYB_2270 putative hydroxylase; PFAM: 2OG-Fe(II) oxygenase; SMART: Prolyl 4-hydroxylase alpha subunit; SPTR: PKHD-type hydroxylase CYA_2611.
  
    0.425
Chro_5176
PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes; TIGRFAM: TonB-dependent siderophore receptor; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR012910:IPR000531:IPR010105; KEGG: ana:all2148 ferrichrome-iron receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor.
 
    
0.403
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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