STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5280Citrate transporter; PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680; KEGG: scl:sce3557 putative sodium:sulfate symporter; PFAM: Citrate transporter; SPTR: Putative sodium:sulfate symporter. (501 aa)    
Predicted Functional Partners:
Chro_5281
PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR004358:IPR003660:IPR003594:IPR005467; KEGG: min:Minf_1023 signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SPTR: Putative Histidine kinase.
 
     0.873
Chro_5282
PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: scl:sce3558 hypothetical protein; PFAM: glycerate kinase; PRIAM: Glycerate kinase; SPTR: GlxK protein; TIGRFAM: glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
     0.720
Chro_0934
KEGG: cyh:Cyan8802_4017 SMP-30/gluconolaconase/LRE domain protein; SPTR: SMP-30/Gluconolaconase/LRE domain protein.
  
     0.676
Chro_2026
Multi-sensor signal transduction histidine kinase; PFAM: Response regulator receiver domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR004358:IPR005467:IPR001789:IPR 000700:IPR003018:IPR013656:IPR013655:IPR003661:IPR003594:I PR001610; KEGG: cyn:Cyan7425_4608 multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; GAF domain protein; PAS fold-3 [...]
 
   
 0.494
Chro_2988
PFAM: Photosystem II protein; Photosystem I reaction centre subunit XI; TIGRFAM: chlorophyll a/b binding light-harvesting protein; InterPro IPR000932:IPR003757; KEGG: ana:all4002 hypothetical protein; PFAM: photosystem antenna family protein; photosystem I reaction centre subunit XI PsaL; SPTR: Putative uncharacterized protein.
  
     0.463
Chro_2030
Putative PAS/PAC sensor protein; PFAM: Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR000014:IPR001789:IPR013767; KEGG: cyn:Cyan7425_4612 putative PAS/PAC sensor protein; PFAM: response regulator receiver; PAS fold domain protein; SMART: response regulator receiver; PAS domain containing protein; SPTR: Putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein.
  
     0.454
Chro_1408
KEGG: cyc:PCC7424_4970 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.453
Chro_2488
PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dfe:Dfer_4020 glycosyl transferase group 1; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase group 1.
  
    0.450
Chro_1407
KEGG: ter:Tery_3474 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.430
Chro_3578
SSS sodium solute transporter superfamily; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.410
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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