STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5318KEGG: ana:all3999 hypothetical protein; SPTR: Putative uncharacterized protein. (91 aa)    
Predicted Functional Partners:
Chro_4063
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; COGs: COG2891 Cell shape-determining protein; InterPro IPR007227; KEGG: naz:Aazo_0868 rod shape-determining protein MreD; SPTR: PEP-CTERM putative exosortase interaction domain protein; TIGRFAM: rod shape-determining protein MreD.
  
     0.773
Chro_2940
KEGG: npu:Npun_R1604 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.769
Chro_5144
PFAM: Protein of unknown function (DUF3493); KEGG: ava:Ava_3179 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.750
Chro_3012
KEGG: ana:all1987 hypothetical protein; SPTR: All1987 protein.
  
     0.737
Chro_4582
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ava:Ava_4250 Mo-dependent nitrogenase-like; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase-like.
  
     0.725
Chro_2215
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: syf:Synpcc7942_1141 hypothetical protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase-like protein.
  
     0.720
Chro_2143
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: naz:Aazo_2363 Mo-dependent nitrogenase family protein; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase C-terminal domain family protein.
  
     0.717
Chro_3240
PFAM: Mo-dependent nitrogenase C-terminus; InterPro IPR009717; KEGG: ava:Ava_4669 Mo-dependent nitrogenase-like; PFAM: Mo-dependent nitrogenase family protein; SPTR: Mo-dependent nitrogenase-like.
  
     0.715
Chro_5184
KEGG: npu:Npun_R0654 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.713
Chro_0124
KEGG: npu:Npun_R5959 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.712
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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