STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chro_5399KEGG: npu:Npun_R3911 hypothetical protein; SPTR: Putative uncharacterized protein. (218 aa)    
Predicted Functional Partners:
Chro_2770
KEGG: ana:all0476 hypothetical protein; SPTR: All0476 protein.
  
   
 0.796
Chro_4976
TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339; KEGG: ava:Ava_0524 AbrB family transcriptional regulator; SPTR: Alr0946 protein; TIGRFAM: transcriptional regulator, AbrB family.
  
     0.771
Chro_0665
PFAM: Protein of unknown function (DUF3288); KEGG: ana:asl1962 hypothetical protein; SPTR: Asl1962 protein.
  
     0.765
Chro_1464
PFAM: Protein of unknown function (DUF2811); KEGG: npu:Npun_F4100 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.761
Chro_1013
PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein; InterPro IPR010220; KEGG: ava:Ava_4475 CO2 hydration; PFAM: CO2 hydration family protein; SPTR: CO2 hydration; TIGRFAM: CO2 hydration protein.
  
     0.758
Chro_0630
KEGG: naz:Aazo_1207 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.754
Chro_1294
PFAM: Protein of function (DUF2518); InterPro IPR019664; KEGG: cyn:Cyan7425_4474 hypothetical protein; PFAM: Protein of unknown function DUF2518; SPTR: Putative uncharacterized protein.
  
     0.753
Chro_2583
Polypeptide-transport-associated domain protein FtsQ-type; Essential cell division protein.
  
     0.751
ndhO
Hypothetical protein; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.749
Chro_4729
Hypothetical protein; PFAM: Domain of unknown function (DUF1821); KEGG: ava:Ava_4351 hypothetical protein; SPTR: Conserved domain protein.
  
     0.749
Your Current Organism:
Chroococcidiopsis thermalis
NCBI taxonomy Id: 251229
Other names: C. thermalis PCC 7203, Chroococcidiopsis sp. ATCC 27900, Chroococcidiopsis sp. PCC 7203, Chroococcidiopsis thermalis PCC 7203, Chroococcidiopsis thermalis str. PCC 7203
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