STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS58929.1Putative ABC transport system ATP-binding protein. (228 aa)    
Predicted Functional Partners:
SIS58949.1
Putative ABC transport system permease protein.
 0.999
SIT09471.1
Putative ABC transport system permease protein.
 0.998
SIT09439.1
HlyD family secretion protein.
 
 
 0.986
SIS58914.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.976
SIT05442.1
Outer membrane lipoprotein-sorting protein.
   
 
 0.866
SIS58421.1
Molybdate/tungstate transport system permease protein.
 
 
  0.732
SIS58989.1
Hypothetical protein.
 
     0.558
SIS58897.1
Hypothetical protein.
       0.535
SIS58970.1
Hypothetical protein.
       0.501
SIS83451.1
iron(III) transport system permease protein.
  
 
  0.494
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.