STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS67640.1Carbohydrate ABC transporter substrate-binding protein, CUT1 family. (437 aa)    
Predicted Functional Partners:
SIS67625.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.964
SIS67608.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.961
SIS84163.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.904
SIS93340.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.897
SIS93360.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.892
SIS84178.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.889
SIS93816.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.887
SIS75007.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.886
SIS80059.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.886
SIS93851.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.886
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
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