STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS75425.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
SIS75408.1
Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
       0.800
SIS75438.1
Small conductance mechanosensitive channel.
  
    0.761
SIS67315.1
Uncharacterized protein, UPF0297 family.
  
     0.760
SIS66540.1
tRNA (adenine22-N1)-methyltransferase.
  
     0.691
SIT01252.1
Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.
  
     0.670
SIS89984.1
Hypothetical protein.
  
     0.651
SIS75453.1
Hypothetical protein.
       0.623
SIT07094.1
Stage V sporulation protein B.
  
     0.575
SIS84843.1
Polysaccharide transporter, PST family.
  
     0.557
SIT00740.1
Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.
  
     0.536
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.