STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS90279.1Chemotaxis protein CheC. (206 aa)    
Predicted Functional Partners:
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 0.999
SIS90474.1
Flagellar motor switch protein FliM.
 
 0.991
SIS90461.1
Flagellar motor switch protein FliN/FliY.
 
0.990
SIS90306.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.974
SIS90318.1
Two-component system, chemotaxis family, response regulator CheB.
 
 
 0.973
SIS90446.1
Two-component system, chemotaxis family, response regulator CheY.
 
 
 0.971
SIS90294.1
Purine-binding chemotaxis protein CheW.
 
 
 0.965
SIS90663.1
Flagellar motor switch protein FliG.
 
 0.962
SIT03875.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
  
 
 0.954
SIS90332.1
Flagellar biosynthesis protein FlhG.
  
    0.933
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
Server load: low (16%) [HD]