Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS90279.1 | SIS90294.1 | SAMN05421799_106166 | SAMN05421799_106167 | Chemotaxis protein CheC. | Purine-binding chemotaxis protein CheW. | 0.965 |
SIS90279.1 | SIS90306.1 | SAMN05421799_106166 | SAMN05421799_106168 | Chemotaxis protein CheC. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.974 |
SIS90279.1 | SIS90318.1 | SAMN05421799_106166 | SAMN05421799_106169 | Chemotaxis protein CheC. | Two-component system, chemotaxis family, response regulator CheB. | 0.973 |
SIS90279.1 | SIS90332.1 | SAMN05421799_106166 | SAMN05421799_106170 | Chemotaxis protein CheC. | Flagellar biosynthesis protein FlhG. | 0.933 |
SIS90279.1 | SIS90446.1 | SAMN05421799_106166 | SAMN05421799_106178 | Chemotaxis protein CheC. | Two-component system, chemotaxis family, response regulator CheY. | 0.971 |
SIS90279.1 | SIS90461.1 | SAMN05421799_106166 | SAMN05421799_106179 | Chemotaxis protein CheC. | Flagellar motor switch protein FliN/FliY. | 0.990 |
SIS90279.1 | SIS90474.1 | SAMN05421799_106166 | SAMN05421799_106180 | Chemotaxis protein CheC. | Flagellar motor switch protein FliM. | 0.991 |
SIS90279.1 | SIS90663.1 | SAMN05421799_106166 | SAMN05421799_106191 | Chemotaxis protein CheC. | Flagellar motor switch protein FliG. | 0.962 |
SIS90279.1 | SIT03875.1 | SAMN05421799_106166 | SAMN05421799_110112 | Chemotaxis protein CheC. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.954 |
SIS90279.1 | cheD | SAMN05421799_106166 | SAMN05421799_106165 | Chemotaxis protein CheC. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.999 |
SIS90294.1 | SIS90279.1 | SAMN05421799_106167 | SAMN05421799_106166 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheC. | 0.965 |
SIS90294.1 | SIS90306.1 | SAMN05421799_106167 | SAMN05421799_106168 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.996 |
SIS90294.1 | SIS90318.1 | SAMN05421799_106167 | SAMN05421799_106169 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, response regulator CheB. | 0.989 |
SIS90294.1 | SIS90332.1 | SAMN05421799_106167 | SAMN05421799_106170 | Purine-binding chemotaxis protein CheW. | Flagellar biosynthesis protein FlhG. | 0.861 |
SIS90294.1 | SIS90446.1 | SAMN05421799_106167 | SAMN05421799_106178 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, response regulator CheY. | 0.863 |
SIS90294.1 | SIS90461.1 | SAMN05421799_106167 | SAMN05421799_106179 | Purine-binding chemotaxis protein CheW. | Flagellar motor switch protein FliN/FliY. | 0.996 |
SIS90294.1 | SIS90474.1 | SAMN05421799_106167 | SAMN05421799_106180 | Purine-binding chemotaxis protein CheW. | Flagellar motor switch protein FliM. | 0.873 |
SIS90294.1 | SIS90663.1 | SAMN05421799_106167 | SAMN05421799_106191 | Purine-binding chemotaxis protein CheW. | Flagellar motor switch protein FliG. | 0.663 |
SIS90294.1 | SIT03875.1 | SAMN05421799_106167 | SAMN05421799_110112 | Purine-binding chemotaxis protein CheW. | Two-component system, chemotaxis family, CheB/CheR fusion protein. | 0.997 |
SIS90294.1 | cheD | SAMN05421799_106167 | SAMN05421799_106165 | Purine-binding chemotaxis protein CheW. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.970 |
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