STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS90294.1Purine-binding chemotaxis protein CheW. (155 aa)    
Predicted Functional Partners:
SIT03875.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
 
 0.997
SIS90306.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.996
SIS90461.1
Flagellar motor switch protein FliN/FliY.
 
 
 0.996
SIS90318.1
Two-component system, chemotaxis family, response regulator CheB.
 
 
 0.989
SIT13114.1
Two-component system, chemotaxis family, sensor kinase CheA.
 
 0.988
SIS54191.1
Methyl-accepting chemotaxis protein.
 
 0.985
SIT07520.1
Methyl-accepting chemotaxis protein.
 
 0.985
SIT13063.1
Methyl-accepting chemotaxis protein.
 
 0.985
cheD
Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.
 
 
 0.970
SIS90279.1
Chemotaxis protein CheC.
 
 
 0.965
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
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