STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS94251.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
SIS94344.1
Hypothetical protein.
  
 0.996
SIS94217.1
Uncharacterized protein.
  
 0.983
SIS94233.1
Hypothetical protein.
 
  
 0.980
SIS94285.1
Hypothetical protein.
       0.775
SIS94267.1
BFD-like [2Fe-2S] binding domain-containing protein.
       0.773
SIS94303.1
Nicotinate-nucleotide pyrophosphorylase (carboxylating).
       0.773
SIS94323.1
Molybdenum cofactor synthesis domain-containing protein.
       0.699
SIS94364.1
Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.
       0.627
SIS94197.1
Two component transcriptional regulator, AraC family.
       0.531
SIS94181.1
2-furoate---CoA ligase.
       0.465
Your Current Organism:
Alicyclobacillus vulcanalis
NCBI taxonomy Id: 252246
Other names: A. vulcanalis, ATCC BAA-915, Alicyclobacillus vulcanalis Simbahan et al. 2004, Alicyclobacillus vulcanis, DSM 16176, strain CsHg2
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.