STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ03467.1COG0785 Cytochrome c biogenesis protein. (249 aa)    
Predicted Functional Partners:
EAQ04411.1
Thioredoxin, thioldisulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.740
EAQ02919.1
Putative thiol:disulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.651
EAQ03468.1
Hypothetical protein.
       0.612
EAQ03469.1
COG2124 Cytochrome P450.
       0.595
EAQ03466.1
SirA family protein; COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
       0.582
EAQ01597.1
Probable thiol-disulfide interchange protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
 
  
 0.567
ccmC
ABC heme exporter, inner membrane subunit CcmC; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
  
  
 0.493
EAQ04421.1
gufA protein; COG0428 Predicted divalent heavy-metal cations transporter.
   
    0.431
EAQ01391.1
Hypothetical protein; COG0428 Predicted divalent heavy-metal cations transporter.
   
    0.431
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
     
 0.404
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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