STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ03493.1Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins. (1210 aa)    
Predicted Functional Partners:
EAQ01542.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
   
 0.625
EAQ04814.1
Hemolysin-type calcium-binding protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
 
 
0.595
EAQ02323.1
Hemolysin-type calcium-binding protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.588
EAQ03086.1
Hypothetical protein; COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
 
0.570
EAQ04757.1
Hemolysin-type calcium-binding protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.564
EAQ01241.1
Hypothetical protein.
   
   0.560
EAQ01242.1
Hypothetical protein.
   
   0.560
EAQ03801.1
Type I secretion target repeat protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
 
0.558
EAQ03492.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
    0.537
EAQ03494.1
COG1376 Uncharacterized protein conserved in bacteria.
 
     0.523
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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