STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ01572.1Hypothetical protein; COG0438 Glycosyltransferase. (366 aa)    
Predicted Functional Partners:
EAQ01569.1
Putative glycosyltransferase protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
 0.827
EAQ01573.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
 
  0.821
EAQ03075.1
Capsular polysaccharide synthesis enzyme CapF; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
 0.818
EAQ01571.1
Hypothetical protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.780
EAQ01570.1
Hypothetical protein; COG0438 Glycosyltransferase.
       0.773
EAQ01999.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
 0.678
EAQ04182.1
TPR domain protein; COG0457 FOG: TPR repeat.
  
 
 0.580
EAQ01568.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
  
  
 0.575
EAQ01574.1
Polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
 
 0.524
EAQ03096.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
  
 
 0.460
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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