Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ04267.1TRAP-T family transporter, periplasmic binding protein; COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component. (331 aa)    
Predicted Functional Partners:
EAQ04269.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
  
  0.990
EAQ04268.1
TRAP dicarboxylate transporter, DctM subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component.
 
  
  0.988
EAQ04264.1
Aldehyde dehydrogenase, putative; COG1012 NAD-dependent aldehyde dehydrogenases.
 
     0.890
EAQ04266.1
Gamma-glutamylisopropylamide synthetase, putative; COG0174 Glutamine synthetase.
 
     0.886
EAQ04271.1
Transcriptional regulator, RpiR family protein; COG1737 Transcriptional regulators.
 
    0.856
EAQ04270.1
COG3931 Predicted N-formylglutamate amidohydrolase.
 
     0.836
EAQ04263.1
COG1454 Alcohol dehydrogenase, class IV.
 
     0.769
EAQ04751.1
Putative membrane protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
     0.629
EAQ04265.1
Probable biphenyl-2,3-diol 1,2-dioxygenase III; COG0346 Lactoylglutathione lyase and related lyases.
       0.570
EAQ01530.1
TRAP dicarboxylate transporter, DctQ subunit; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.535
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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