STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ03763.1Peptide/opine/nickel uptake family ABC transporter, ATP-binding protein; COG4172 ABC-type uncharacterized transport system, duplicated ATPase component; Belongs to the ABC transporter superfamily. (528 aa)    
Predicted Functional Partners:
EAQ03764.1
Peptide/opine/nickel uptake family ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.992
EAQ03765.1
Peptide/opine/nickel uptake family ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.971
EAQ02085.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.923
EAQ01050.1
Peptide/nickel/opine uptake family ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.904
EAQ04284.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.897
EAQ01562.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.869
EAQ02084.1
Putative ABC transporter permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.869
EAQ01563.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.857
EAQ03667.1
Oligopeptide/dipeptide uptake family ABC transporter, permease protein; COG4239 ABC-type uncharacterized transport system, permease component.
 
 0.857
EAQ03668.1
Oligopeptide/dipeptide uptake family ABC transporter, permease protein; COG4174 ABC-type uncharacterized transport system, permease component.
 
 
 0.846
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.