Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ01397.1COG1495 Disulfide bond formation protein DsbB; Belongs to the DsbB family. (140 aa)    
Predicted Functional Partners:
EAQ01396.1
dsbA-like thioredoxin domain protein; COG1651 Protein-disulfide isomerase.
 
 
 0.971
EAQ01398.1
Probable lipoprotein; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
     0.906
EAQ01393.1
Peptidase M23B; COG0739 Membrane proteins related to metalloendopeptidases.
 
     0.884
EAQ01394.1
SCO1/2 family protein; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
     0.879
EAQ04658.1
dsbA-like thioredoxin domain protein; COG1651 Protein-disulfide isomerase.
 
 
 0.878
EAQ01395.1
COG2847 Uncharacterized protein conserved in bacteria.
 
     0.868
EAQ01366.1
27kDa outer membrane protein; COG1651 Protein-disulfide isomerase.
 
 
 0.725
lspA-3
Putative lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.
 
     0.700
EAQ01392.1
COG3019 Predicted metal-binding protein.
 
     0.678
EAQ04656.1
SCO1/2 family protein; COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
     0.666
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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