STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ01409.1COG1276 Putative copper export protein. (292 aa)    
Predicted Functional Partners:
EAQ01408.1
COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
 
  
 0.956
EAQ04622.1
COG2372 Uncharacterized protein, homolog of Cu resistance protein CopC.
 
  
 0.814
EAQ01407.1
COG3667 Uncharacterized protein involved in copper resistance.
       0.580
EAQ03092.1
Hypothetical protein.
  
     0.559
EAQ03091.1
Hypothetical protein; COG3754 Lipopolysaccharide biosynthesis protein.
  
     0.477
EAQ01406.1
COG2132 Putative multicopper oxidases.
     
 0.406
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.