STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ02225.15-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family. (502 aa)    
Predicted Functional Partners:
EAQ02226.1
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.808
EAQ02224.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
    
  0.797
EAQ02223.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
  
    0.774
EAQ02227.1
Putative beta-lactamase; COG0491 Zn-dependent hydrolases, including glyoxylases.
  
    0.774
EAQ02918.1
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.760
EAQ03954.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
  
 
 0.759
EAQ02222.1
Arylmalonate decarboxylase; COG3473 Maleate cis-trans isomerase.
       0.757
EAQ02221.1
Hypothetical protein; COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases.
  
 
  0.711
pckA
Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
  
 
 0.700
EAQ04883.1
Malate dehydrogenase; COG0281 Malic enzyme.
  
 
 0.684
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.