STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ02372.1Hypothetical protein. (176 aa)    
Predicted Functional Partners:
EAQ02370.1
Hypothetical protein.
       0.778
EAQ02376.1
Asparaginase/glutaminase; COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D.
    
  0.774
EAQ02369.1
Hypothetical protein.
       0.773
EAQ02371.1
Hypothetical protein; COG1482 Phosphomannose isomerase.
       0.773
EAQ02373.1
Dihydroorotate dehydrogenase electron transfer subunit; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
       0.773
pyrD
Probable dihydroorotate dehydrogenase, catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.
       0.773
EAQ02368.1
Hypothetical protein; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
       0.771
EAQ02375.1
COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
       0.718
EAQ04375.1
Hypothetical protein; COG3573 Predicted oxidoreductase.
     
 0.533
EAQ02377.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
       0.512
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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