STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ02078.1COG1309 Transcriptional regulator. (179 aa)    
Predicted Functional Partners:
EAQ02650.1
Hypothetical protein.
  
     0.670
EAQ02077.1
Hypothetical protein; COG1409 Predicted phosphohydrolases.
 
     0.652
EAQ02076.1
Glycerol-3-phosphate ABC transporter substrate-binding protein; COG1653 ABC-type sugar transport system, periplasmic component.
 
     0.649
EAQ02073.1
COG2365 Protein tyrosine/serine phosphatase.
 
     0.561
EAQ02655.1
Hypothetical protein; COG1752 Predicted esterase of the alpha-beta hydrolase superfamily.
  
     0.525
EAQ02654.1
Hypothetical protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
     0.500
EAQ02653.1
Hypothetical protein; COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily).
  
     0.423
Your Current Organism:
Pseudooceanicola batsensis
NCBI taxonomy Id: 252305
Other names: Oceanicola batsensis HTCC2597, Oceanicola batsensis KCTC 12145, P. batsensis HTCC2597, Pseudooceanicola batsensis HTCC2597, Pseudooceanicola batsensis KCTC 12145
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