STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOC10323.1PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology. (154 aa)    
Predicted Functional Partners:
OOC10319.1
Phosphocarrier protein HPr; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
OOC10320.1
PTS fructose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.979
OOC10321.1
RNase adaptor protein RapZ; Displays ATPase and GTPase activities.
  
  
 0.970
OOC10324.1
Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.961
OOC10322.1
HPr(Ser) kinase/phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HPrK/P family.
 
  
 0.928
OOC10325.1
RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 0.911
OOC09339.1
Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.
  
   
 0.772
OOC10326.1
LPS export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.631
OOC09263.1
Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
  
 
 0.598
OOC09845.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.527
Your Current Organism:
Thioalkalivibrio halophilus
NCBI taxonomy Id: 252474
Other names: DSM 15791, Thialkalivibrio halophilus, Thioalkalivibrio halophilus corrig. Banciu et al. 2005, UNIQEM U225, strain HL 17
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