STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOC09255.1Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)    
Predicted Functional Partners:
OOC10179.1
Sulfide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.930
OOC11277.1
Cytochrome c oxidase, cbb3-type subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.836
OOC11276.1
Cytochrome-c oxidase, cbb3-type subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
 0.824
OOC08894.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.712
OOC09191.1
Cytochrome c1; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.601
OOC10180.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.574
OOC09193.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.544
OOC09192.1
Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.523
OOC09254.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.
  
    0.519
OOC10519.1
Cysteine synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.513
Your Current Organism:
Thioalkalivibrio halophilus
NCBI taxonomy Id: 252474
Other names: DSM 15791, Thialkalivibrio halophilus, Thioalkalivibrio halophilus corrig. Banciu et al. 2005, UNIQEM U225, strain HL 17
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