STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOC09056.1CbbQ/NirQ/NorQ/GpvN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
OOC09055.1
VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
OOC10103.1
VWA domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
OOC09054.1
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.792
OOC09375.1
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.601
OOC09376.1
Sulfur oxidation c-type cytochrome SoxX; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.601
OOC09053.1
PAS domain S-box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.561
OOC09057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.515
Your Current Organism:
Thioalkalivibrio halophilus
NCBI taxonomy Id: 252474
Other names: DSM 15791, Thialkalivibrio halophilus, Thioalkalivibrio halophilus corrig. Banciu et al. 2005, UNIQEM U225, strain HL 17
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.