Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AMX01244.1 | AMX04200.1 | A3224_00415 | A3224_10840 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
| AMX01659.1 | AMX04200.1 | A3224_02865 | A3224_10840 | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| AMX01659.1 | copA | A3224_02865 | A3224_12800 | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cu+ exporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.571 |
| AMX02105.1 | AMX03553.1 | A3224_05480 | A3224_14075 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Imelysin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.614 |
| AMX02105.1 | AMX04200.1 | A3224_05480 | A3224_10840 | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
| AMX02540.1 | AMX04200.1 | A3224_08020 | A3224_10840 | Thioredoxin-disulfide reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.582 |
| AMX02540.1 | copA | A3224_08020 | A3224_12800 | Thioredoxin-disulfide reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cu+ exporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.527 |
| AMX02902.1 | AMX04200.1 | A3224_10235 | A3224_10840 | Glucarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
| AMX02999.1 | AMX04199.1 | A3224_10830 | A3224_10835 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.979 |
| AMX02999.1 | AMX04200.1 | A3224_10830 | A3224_10840 | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.978 |
| AMX03000.1 | AMX04199.1 | A3224_10845 | A3224_10835 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.409 |
| AMX03000.1 | AMX04200.1 | A3224_10845 | A3224_10840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.533 |
| AMX03553.1 | AMX02105.1 | A3224_14075 | A3224_05480 | Imelysin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.614 |
| AMX03553.1 | AMX04200.1 | A3224_14075 | A3224_10840 | Imelysin; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.726 |
| AMX04199.1 | AMX02999.1 | A3224_10835 | A3224_10830 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily. | 0.979 |
| AMX04199.1 | AMX03000.1 | A3224_10835 | A3224_10845 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.409 |
| AMX04199.1 | AMX04200.1 | A3224_10835 | A3224_10840 | Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.998 |
| AMX04200.1 | AMX01244.1 | A3224_10840 | A3224_00415 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.539 |
| AMX04200.1 | AMX01659.1 | A3224_10840 | A3224_02865 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.804 |
| AMX04200.1 | AMX02105.1 | A3224_10840 | A3224_05480 | Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.608 |
page 1 of 2
