STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMX03034.1Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology. (60 aa)    
Predicted Functional Partners:
AMX03033.1
Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
AMX03036.1
Cytochrome c oxidase accessory protein CcoG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.825
AMX04205.1
Cytochrome C oxidase Cbb3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
 
  
 0.804
AMX03038.1
Cytochrome C oxidase Cbb3; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.802
AMX03039.1
Cytochrome C oxidase Cbb3; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.766
A3224_11065
ATPase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.751
copA
Cu+ exporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.554
A3224_00210
MATE family efflux transporter; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.440
AMX03037.1
Cytochrome C oxidase Cbb3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.403
Your Current Organism:
Microbulbifer thermotolerans
NCBI taxonomy Id: 252514
Other names: DSM 19189, JCM 14709, M. thermotolerans, Microbulbifer sp. JAMB-A94, Microbulbifer thermotolerans Miyazaki et al. 2008, strain JAMB A94
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