STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_09757BZIP domain-containing protein. (285 aa)    
Predicted Functional Partners:
VSDG_10068
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
 0.995
VSDG_04971
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.995
VSDG_03345
Uncharacterized protein.
   
 0.995
VSDG_02429
Uncharacterized protein.
   
 0.995
VSDG_10016
Uncharacterized protein.
   
 0.994
VSDG_09282
Ribosomal_S10 domain-containing protein.
   
 0.994
VSDG_09135
Ribosomal_L2_C domain-containing protein.
   
 0.994
VSDG_08168
Uncharacterized protein.
   
 0.994
VSDG_08167
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.994
VSDG_07804
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
   
 0.994
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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