STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_07571AlcB domain-containing protein. (453 aa)    
Predicted Functional Partners:
VSDG_07910
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
    
 0.792
VSDG_04304
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
    
  0.650
VSDG_07665
Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatB/GatE family. GatB subfamily.
    
  0.638
VSDG_03998
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth.
    
 0.629
VSDG_07148
Uncharacterized protein.
    
  0.622
VSDG_05394
Uncharacterized protein.
    
  0.622
VSDG_04834
APH domain-containing protein.
    
  0.622
VSDG_04826
Uncharacterized protein.
    
  0.622
VSDG_02538
Ion_trans domain-containing protein.
    
  0.622
VSDG_02558
APH domain-containing protein.
    
  0.622
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.