Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VSDG_00043 | VSDG_01059 | A0A423WP00 | A0A423WLA3 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.562 |
VSDG_00043 | VSDG_01377 | A0A423WP00 | A0A423WJ28 | Uncharacterized protein. | Bac_surface_Ag domain-containing protein. | 0.702 |
VSDG_00043 | VSDG_03663 | A0A423WP00 | A0A423W6R9 | Uncharacterized protein. | Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.566 |
VSDG_00043 | VSDG_04071 | A0A423WP00 | A0A423W0R3 | Uncharacterized protein. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.551 |
VSDG_00043 | VSDG_06415 | A0A423WP00 | A0A423VPG7 | Uncharacterized protein. | Uncharacterized protein. | 0.982 |
VSDG_00043 | VSDG_06950 | A0A423WP00 | A0A423VRW3 | Uncharacterized protein. | Uncharacterized protein. | 0.925 |
VSDG_00043 | VSDG_07006 | A0A423WP00 | A0A423VRR3 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
VSDG_00043 | VSDG_09450 | A0A423WP00 | A0A423VAR8 | Uncharacterized protein. | Uncharacterized protein. | 0.421 |
VSDG_01059 | VSDG_00043 | A0A423WLA3 | A0A423WP00 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.562 |
VSDG_01059 | VSDG_02491 | A0A423WLA3 | A0A423WFW2 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.755 |
VSDG_01059 | VSDG_03072 | A0A423WLA3 | A0A423W8L0 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.748 |
VSDG_01059 | VSDG_03663 | A0A423WLA3 | A0A423W6R9 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.499 |
VSDG_01059 | VSDG_04071 | A0A423WLA3 | A0A423W0R3 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. | 0.931 |
VSDG_01059 | VSDG_06950 | A0A423WLA3 | A0A423VRW3 | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | Uncharacterized protein. | 0.910 |
VSDG_01377 | VSDG_00043 | A0A423WJ28 | A0A423WP00 | Bac_surface_Ag domain-containing protein. | Uncharacterized protein. | 0.702 |
VSDG_01377 | VSDG_03663 | A0A423WJ28 | A0A423W6R9 | Bac_surface_Ag domain-containing protein. | Dynamin-type G domain-containing protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family. | 0.445 |
VSDG_01377 | VSDG_06415 | A0A423WJ28 | A0A423VPG7 | Bac_surface_Ag domain-containing protein. | Uncharacterized protein. | 0.972 |
VSDG_01377 | VSDG_06950 | A0A423WJ28 | A0A423VRW3 | Bac_surface_Ag domain-containing protein. | Uncharacterized protein. | 0.853 |
VSDG_01377 | VSDG_07006 | A0A423WJ28 | A0A423VRR3 | Bac_surface_Ag domain-containing protein. | Uncharacterized protein. | 0.619 |
VSDG_02491 | VSDG_01059 | A0A423WFW2 | A0A423WLA3 | Uncharacterized protein. | Cytochrome c domain-containing protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain. | 0.755 |
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