STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_05761Uncharacterized protein. (386 aa)    
Predicted Functional Partners:
VSDG_10016
Uncharacterized protein.
   
 0.995
VSDG_08142
Uncharacterized protein.
  
 0.995
VSDG_08135
Uncharacterized protein.
   
 0.995
VSDG_05693
KOW domain-containing protein.
  
 0.995
VSDG_05818
KOW domain-containing protein.
   
 0.995
VSDG_04512
Ribosomal_L23eN domain-containing protein.
   
 0.995
VSDG_03739
Uncharacterized protein.
   
 0.995
VSDG_03982
Uncharacterized protein.
   
 0.995
VSDG_02176
60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.
  
 0.995
VSDG_01103
Uncharacterized protein.
  
 0.995
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.