STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_06017Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
VSDG_10006
Cytochrome c oxidase subunit 6A, mitochondrial.
    
 0.995
VSDG_08392
Uncharacterized protein.
   
 0.995
VSDG_07162
Uncharacterized protein.
    
 0.995
VSDG_05793
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
    
 0.995
VSDG_03302
Uncharacterized protein.
   
 0.994
VSDG_00101
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
  
 0.994
VSDG_01993
Cytochrome c domain-containing protein.
  
 0.991
VSDG_09820
Uncharacterized protein.
  
 0.984
VSDG_04722
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
 0.984
VSDG_01504
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
   
 0.984
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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