Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VSDG_00163 | VSDG_04136 | A0A423WQ89 | A0A423W0Z1 | Uncharacterized protein. | Uncharacterized protein. | 0.872 |
VSDG_00163 | VSDG_04706 | A0A423WQ89 | A0A423W1X4 | Uncharacterized protein. | Uncharacterized protein. | 0.817 |
VSDG_00163 | VSDG_04791 | A0A423WQ89 | A0A423W1P0 | Uncharacterized protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.821 |
VSDG_00163 | VSDG_06062 | A0A423WQ89 | A0A423VWI2 | Uncharacterized protein. | SCP domain-containing protein; Belongs to the CRISP family. | 0.815 |
VSDG_00163 | VSDG_08191 | A0A423WQ89 | A0A423VH50 | Uncharacterized protein. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.872 |
VSDG_00163 | VSDG_09834 | A0A423WQ89 | A0A423V923 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.955 |
VSDG_03649 | VSDG_06062 | A0A423W6N8 | A0A423VWI2 | ATP-grasp domain-containing protein. | SCP domain-containing protein; Belongs to the CRISP family. | 0.587 |
VSDG_04136 | VSDG_00163 | A0A423W0Z1 | A0A423WQ89 | Uncharacterized protein. | Uncharacterized protein. | 0.872 |
VSDG_04136 | VSDG_06062 | A0A423W0Z1 | A0A423VWI2 | Uncharacterized protein. | SCP domain-containing protein; Belongs to the CRISP family. | 0.493 |
VSDG_04136 | VSDG_09834 | A0A423W0Z1 | A0A423V923 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family. | 0.507 |
VSDG_04706 | VSDG_00163 | A0A423W1X4 | A0A423WQ89 | Uncharacterized protein. | Uncharacterized protein. | 0.817 |
VSDG_04706 | VSDG_06062 | A0A423W1X4 | A0A423VWI2 | Uncharacterized protein. | SCP domain-containing protein; Belongs to the CRISP family. | 0.436 |
VSDG_04791 | VSDG_00163 | A0A423W1P0 | A0A423WQ89 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | Uncharacterized protein. | 0.821 |
VSDG_04791 | VSDG_06062 | A0A423W1P0 | A0A423VWI2 | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | SCP domain-containing protein; Belongs to the CRISP family. | 0.436 |
VSDG_06062 | VSDG_00163 | A0A423VWI2 | A0A423WQ89 | SCP domain-containing protein; Belongs to the CRISP family. | Uncharacterized protein. | 0.815 |
VSDG_06062 | VSDG_03649 | A0A423VWI2 | A0A423W6N8 | SCP domain-containing protein; Belongs to the CRISP family. | ATP-grasp domain-containing protein. | 0.587 |
VSDG_06062 | VSDG_04136 | A0A423VWI2 | A0A423W0Z1 | SCP domain-containing protein; Belongs to the CRISP family. | Uncharacterized protein. | 0.493 |
VSDG_06062 | VSDG_04706 | A0A423VWI2 | A0A423W1X4 | SCP domain-containing protein; Belongs to the CRISP family. | Uncharacterized protein. | 0.436 |
VSDG_06062 | VSDG_04791 | A0A423VWI2 | A0A423W1P0 | SCP domain-containing protein; Belongs to the CRISP family. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.436 |
VSDG_06062 | VSDG_08191 | A0A423VWI2 | A0A423VH50 | SCP domain-containing protein; Belongs to the CRISP family. | NADH-cytochrome b5 reductase; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. | 0.493 |
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