STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_04972ANK_REP_REGION domain-containing protein. (168 aa)    
Predicted Functional Partners:
VSDG_06501
Uncharacterized protein.
    
 0.704
VSDG_04356
Uncharacterized protein.
    
 0.704
VSDG_01469
MR_MLE domain-containing protein.
    
 0.704
VSDG_07195
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
  0.587
VSDG_01687
UBA domain-containing protein.
    
  0.583
VSDG_03345
Uncharacterized protein.
    
 0.573
VSDG_03263
Uncharacterized protein.
    
 0.567
VSDG_05858
Uncharacterized protein.
    
  0.526
VSDG_06144
Zn(2)-C6 fungal-type domain-containing protein.
    
  0.504
VSDG_05636
SH3 domain-containing protein.
    
 0.504
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.