STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_04234MFS domain-containing protein. (522 aa)    
Predicted Functional Partners:
VSDG_00067
Uncharacterized protein.
     
 0.766
VSDG_07911
V-SNARE coiled-coil homology domain-containing protein.
     
 0.693
VSDG_00364
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
     
 0.667
VSDG_05229
ENTH domain-containing protein.
     
 0.645
VSDG_02237
t-SNARE coiled-coil homology domain-containing protein.
     
 0.637
VSDG_01786
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which is not clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane.
     
 0.634
VSDG_00828
GRIP domain-containing protein.
     
 0.632
VSDG_07007
t-SNARE coiled-coil homology domain-containing protein.
     
 0.605
VSDG_05142
t-SNARE coiled-coil homology domain-containing protein.
     
 0.605
VSDG_01717
Uncharacterized protein.
     
 0.605
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.