STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_04335Uncharacterized protein. (854 aa)    
Predicted Functional Partners:
VSDG_06297
cAMP-dependent protein kinase regulatory subunit.
   
 0.982
VSDG_00180
Lysophospholipase NTE1; Intracellular phospholipase B that catalyzes the double deacylation of phosphatidylcholine (PC) to glycerophosphocholine (GroPCho). Plays an important role in membrane lipid homeostasis.
   
 0.939
VSDG_04414
Phosphodiesterase.
   
 0.913
VSDG_04701
Uncharacterized protein.
    
 0.887
VSDG_07306
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.878
VSDG_01497
Uncharacterized protein.
    
 0.864
VSDG_02019
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
 0.844
VSDG_03540
Uncharacterized protein.
    
 0.841
VSDG_03795
WD_REPEATS_REGION domain-containing protein.
   
 
 0.834
VSDG_01202
Autophagy-related protein.
   
 
 0.821
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.