Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VSDG_00373 | VSDG_02691 | A0A423WNN5 | A0A423WCG7 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | AAA domain-containing protein. | 0.775 |
VSDG_00373 | VSDG_04620 | A0A423WNN5 | A0A423W2T3 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | VWFA domain-containing protein. | 0.999 |
VSDG_00373 | VSDG_04678 | A0A423WNN5 | A0A423W2M1 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | MPN domain-containing protein. | 0.685 |
VSDG_00373 | VSDG_04757 | A0A423WNN5 | A0A423W1L0 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | UBX domain-containing protein. | 0.708 |
VSDG_00373 | VSDG_07156 | A0A423WNN5 | A0A423VKB6 | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | Proteasome subunit beta. | 0.996 |
VSDG_01737 | VSDG_02691 | A0A423WI08 | A0A423WCG7 | Uncharacterized protein. | AAA domain-containing protein. | 0.821 |
VSDG_01737 | VSDG_04620 | A0A423WI08 | A0A423W2T3 | Uncharacterized protein. | VWFA domain-containing protein. | 0.581 |
VSDG_01737 | VSDG_04678 | A0A423WI08 | A0A423W2M1 | Uncharacterized protein. | MPN domain-containing protein. | 0.895 |
VSDG_01737 | VSDG_04757 | A0A423WI08 | A0A423W1L0 | Uncharacterized protein. | UBX domain-containing protein. | 0.939 |
VSDG_01737 | VSDG_07106 | A0A423WI08 | A0A423VUZ6 | Uncharacterized protein. | UAS domain-containing protein. | 0.968 |
VSDG_01737 | VSDG_07413 | A0A423WI08 | A0A423VHY4 | Uncharacterized protein. | UBA domain-containing protein. | 0.927 |
VSDG_01737 | VSDG_08305 | A0A423WI08 | A0A423VIJ9 | Uncharacterized protein. | OTU domain-containing protein. | 0.960 |
VSDG_02691 | VSDG_00373 | A0A423WCG7 | A0A423WNN5 | AAA domain-containing protein. | 26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. | 0.775 |
VSDG_02691 | VSDG_01737 | A0A423WCG7 | A0A423WI08 | AAA domain-containing protein. | Uncharacterized protein. | 0.821 |
VSDG_02691 | VSDG_03985 | A0A423WCG7 | A0A423W7F4 | AAA domain-containing protein. | SprT-like domain-containing protein. | 0.785 |
VSDG_02691 | VSDG_04620 | A0A423WCG7 | A0A423W2T3 | AAA domain-containing protein. | VWFA domain-containing protein. | 0.777 |
VSDG_02691 | VSDG_04678 | A0A423WCG7 | A0A423W2M1 | AAA domain-containing protein. | MPN domain-containing protein. | 0.863 |
VSDG_02691 | VSDG_04757 | A0A423WCG7 | A0A423W1L0 | AAA domain-containing protein. | UBX domain-containing protein. | 0.854 |
VSDG_02691 | VSDG_07106 | A0A423WCG7 | A0A423VUZ6 | AAA domain-containing protein. | UAS domain-containing protein. | 0.781 |
VSDG_02691 | VSDG_07156 | A0A423WCG7 | A0A423VKB6 | AAA domain-containing protein. | Proteasome subunit beta. | 0.783 |
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