STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_02772TLP1_add_C domain-containing protein. (517 aa)    
Predicted Functional Partners:
VSDG_02371
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.899
VSDG_07570
Uncharacterized protein.
 
  
 0.799
VSDG_06102
Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
 0.714
VSDG_03694
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
   
 0.646
VSDG_03890
Lactamase_B domain-containing protein.
   
 0.568
VSDG_06725
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.454
VSDG_02528
Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.
    
 0.454
VSDG_03801
Uncharacterized protein.
   
 0.452
VSDG_01843
3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite; Belongs to the enoyl-CoA hydratase/isomerase family.
   
  0.442
VSDG_08576
Uncharacterized protein.
   
 
  0.437
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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