STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_02072Uncharacterized protein. (1106 aa)    
Predicted Functional Partners:
VSDG_09403
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.875
VSDG_02512
Arf-GAP domain-containing protein.
    
0.852
VSDG_10161
Arf-GAP domain-containing protein.
    
0.825
VSDG_00055
Arf-GAP domain-containing protein.
   
0.822
VSDG_09770
Uncharacterized protein.
    
 0.777
VSDG_00412
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
     
 0.709
VSDG_04361
UBA domain-containing protein.
    
 0.669
VSDG_02230
Uncharacterized protein.
    
 0.609
VSDG_02165
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.609
VSDG_04544
Uncharacterized protein.
   
 
  0.602
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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