STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_02606SET domain-containing protein. (918 aa)    
Predicted Functional Partners:
VSDG_00781
Uncharacterized protein.
    
 
 0.939
VSDG_07073
Uncharacterized protein.
   
 0.914
VSDG_02762
SET domain-containing protein.
    
 0.902
VSDG_04989
SANT domain-containing protein.
   
 
 0.876
VSDG_03285
Uncharacterized protein.
   
 
 0.876
VSDG_00692
Histone H3; Belongs to the histone H3 family.
    
 0.859
VSDG_04012
Uncharacterized protein.
   
 0.846
VSDG_06394
Histone-lysine N-methyltransferase, H3 lysine-4 specific; Catalytic component of the COMPASS (Set1C) complex that specifically mono-, di- and trimethylates histone H3 to form H3K4me1/2/3, which subsequently plays a role in telomere length maintenance and transcription elongation regulation.
    
 0.840
VSDG_04482
Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.
   
 0.830
VSDG_08510
SET domain-containing protein.
     
 0.808
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.