STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_02487FAD_binding_3 domain-containing protein. (448 aa)    
Predicted Functional Partners:
VSDG_09658
Tryptophan synthase.
     
 0.787
BNA5
Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively; Belongs to the kynureninase family.
  
 
 0.522
VSDG_06713
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.465
VSDG_07088
Uncharacterized protein.
    
  0.460
VSDG_02986
Uncharacterized protein.
    
  0.460
VSDG_01313
Methyltransf_11 domain-containing protein.
    
  0.460
VSDG_00893
Uncharacterized protein.
    
  0.460
VSDG_00163
Uncharacterized protein.
    
 0.434
VSDG_09834
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
    
 0.427
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.