STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VSDG_01916Uncharacterized protein. (286 aa)    
Predicted Functional Partners:
VSDG_09658
Tryptophan synthase.
     
 0.849
VSDG_08134
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
    
 0.686
VSDG_00715
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.631
VSDG_01747
Uncharacterized protein.
    
  0.608
VSDG_08022
ATP synthase subunit gamma.
    
  0.590
VSDG_05220
PALP domain-containing protein.
    
 0.589
VSDG_03832
PALP domain-containing protein.
    
 0.589
VSDG_05773
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
    
  0.569
VSDG_07533
ADSL_C domain-containing protein.
    
  0.563
VSDG_05732
Uncharacterized protein.
     
 0.563
Your Current Organism:
Valsa sordida
NCBI taxonomy Id: 252740
Other names: Cytospora chrysosperma, Sphaeria chrysosperma, V. sordida
Server load: low (16%) [HD]