STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002025665_00651Unannotated protein. (730 aa)    
Predicted Functional Partners:
GCA_002025665_00652
Unannotated protein.
 
 
 0.972
GCA_002025665_00528
Unannotated protein.
 
 
 0.884
GCA_002025665_03842
Unannotated protein.
 
 
 0.881
GCA_002025665_00763
Unannotated protein.
 
     0.768
FE904_16790
Unannotated protein.
 
     0.762
GCA_002025665_00648
Unannotated protein.
 
     0.726
GCA_002025665_03439
Unannotated protein.
 
 
 0.718
GCA_002025665_00826
Unannotated protein.
 
     0.638
GCA_002025665_00654
Unannotated protein.
 
     0.619
GCA_002025665_04649
Unannotated protein.
 
 
 0.583
Your Current Organism:
Chryseobacterium indologenes
NCBI taxonomy Id: 253
Other names: ATCC 29897, C. indologenes, CCUG 14483, CCUG 14556, CDC 3716, CIP 101026, DSM 16777, Flavobacterium indologenes, IFO 14944, LMG 8337, LMG:8337, NBRC 14944, NCTC 10796, strain RH 542
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.