STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002025665_00700Unannotated protein. (187 aa)    
Predicted Functional Partners:
GCA_002025665_00699
Unannotated protein.
 
     0.757
GCA_002025665_00698
Unannotated protein.
 
     0.547
GCA_002025665_00701
Unannotated protein.
       0.542
GCA_002025665_00702
Unannotated protein.
 
     0.479
GCA_002025665_00703
Unannotated protein.
 
     0.465
FE904_07835
Unannotated protein.
 
     0.447
GCA_002025665_00696
Unannotated protein.
       0.419
GCA_002025665_00697
Unannotated protein.
       0.419
Your Current Organism:
Chryseobacterium indologenes
NCBI taxonomy Id: 253
Other names: ATCC 29897, C. indologenes, CCUG 14483, CCUG 14556, CDC 3716, CIP 101026, DSM 16777, Flavobacterium indologenes, IFO 14944, LMG 8337, LMG:8337, NBRC 14944, NCTC 10796, strain RH 542
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.