STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_05116Tr-type G domain-containing protein. (1108 aa)    
Predicted Functional Partners:
PV09_05505
Diphthami_syn_2 domain-containing protein.
    
 0.988
PV09_04019
SBDS family rRNA metabolism protein.
  
 
 0.968
PV09_05389
60S ribosomal protein L5.
  
 0.951
PV09_02705
40S ribosomal protein; Belongs to the universal ribosomal protein uS3 family.
  
 0.951
PV09_01816
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.950
PV09_08726
Ribosomal_L23eN domain-containing protein.
  
 0.950
PV09_02418
Ribosomal protein L29.
  
 0.950
PV09_08357
Ribosomal protein S6.
  
 
 0.947
PV09_01391
60S ribosomal protein L7.
  
 0.946
PV09_08656
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.944
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.