STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_04636Amine oxidase. (488 aa)    
Predicted Functional Partners:
PV09_07272
Tryptophan synthase.
     
 0.833
PV09_05383
Uncharacterized protein.
    
 0.764
PV09_07537
Uncharacterized protein.
    
 0.764
PV09_09185
Uncharacterized protein.
   
 0.735
PV09_02026
WD_REPEATS_REGION domain-containing protein.
    
 0.723
PV09_02066
Aldedh domain-containing protein.
     
 0.721
PV09_07681
Histone H2A; Belongs to the histone H2A family.
    
 0.719
PV09_03034
N-acetyltransferase domain-containing protein.
     
 0.719
PV09_00247
Histone deacetylase RPD3.
    
 0.709
PV09_08685
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.709
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.