STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_03375N-acetyltransferase domain-containing protein. (200 aa)    
Predicted Functional Partners:
PV09_08458
Uncharacterized protein.
   
 0.997
PV09_01444
Sm domain-containing protein.
    
 0.976
PV09_03080
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.858
PV09_06896
Sm domain-containing protein.
    
 0.718
PV09_07453
Aspartate aminotransferase.
     
 0.611
PV09_05579
Asparagine synthase (Glutamine-hydrolyzing).
     
 0.606
PV09_03309
Aspartate aminotransferase.
   
 
  0.606
PV09_07750
N-acetyltransferase domain-containing protein.
   
  
 0.604
PV09_02185
N-acetyltransferase domain-containing protein.
   
  
 0.552
PV09_06827
Uncharacterized protein.
      
 0.539
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.