STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_01947FAD-binding FR-type domain-containing protein. (635 aa)    
Predicted Functional Partners:
PV09_03514
SH3 domain-containing protein.
   
 0.715
PV09_00966
Uncharacterized protein.
   
 0.620
PV09_03026
Uncharacterized protein.
    
 0.527
PV09_02191
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit; The B regulatory subunit might modulate substrate selectivity and catalytic activity, and also might direct the localization of the catalytic enzyme to a particular subcellular compartment.
    
 0.489
PV09_01654
Uncharacterized protein.
    
 0.461
PV09_08790
Uncharacterized protein.
    
 0.455
PV09_04629
Uncharacterized protein.
    
 0.455
PV09_01037
Uncharacterized protein.
    
 0.455
PV09_07040
C2H2-type domain-containing protein.
   
  
 0.428
PV09_03722
MHYT domain-containing protein.
    
  0.420
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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