STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PV09_00961Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
PV09_03415
Protein transporter SEC24.
   
 0.983
PV09_02561
Protein transporter SEC13; Belongs to the WD repeat SEC13 family.
   
 0.977
PV09_09294
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.977
PV09_09194
Uncharacterized protein; Belongs to the synaptobrevin family.
   
 0.965
PV09_06062
Uncharacterized protein.
  
 
 0.943
PV09_02761
Uncharacterized protein.
   
 0.943
PV09_02778
WD_REPEATS_REGION domain-containing protein.
   
 0.943
PV09_04797
Small COPII coat GTPase sar1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.931
PV09_07339
Chitin-binding type-3 domain-containing protein.
   
 0.920
PV09_03642
Uncharacterized protein.
   
 0.920
Your Current Organism:
Verruconis gallopava
NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.