Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LSM4 | PV09_00295 | A0A0D1Y0T6 | A0A0D1Y302 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.907 |
| LSM4 | PV09_02027 | A0A0D1Y0T6 | A0A0D2AJX1 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.883 |
| LSM4 | PV09_04436 | A0A0D1Y0T6 | A0A0D1YVH4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.844 |
| LSM4 | PV09_06760 | A0A0D1Y0T6 | A0A0D2ARW4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | PAT1 domain-containing protein. | 0.999 |
| LSM4 | PV09_08195 | A0A0D1Y0T6 | A0A0D2A0W6 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.884 |
| LSM4 | PV09_09661 | A0A0D1Y0T6 | A0A0D2AI12 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Uncharacterized protein. | 0.786 |
| LSM4 | PV09_09788 | A0A0D1Y0T6 | A0A0D1YCG4 | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Nudix hydrolase domain-containing protein. | 0.676 |
| PV09_00295 | LSM4 | A0A0D1Y302 | A0A0D1Y0T6 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.907 |
| PV09_00295 | PV09_02027 | A0A0D1Y302 | A0A0D2AJX1 | Uncharacterized protein. | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | 0.999 |
| PV09_00295 | PV09_04436 | A0A0D1Y302 | A0A0D1YVH4 | Uncharacterized protein. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.974 |
| PV09_00295 | PV09_06760 | A0A0D1Y302 | A0A0D2ARW4 | Uncharacterized protein. | PAT1 domain-containing protein. | 0.981 |
| PV09_00295 | PV09_08195 | A0A0D1Y302 | A0A0D2A0W6 | Uncharacterized protein. | Uncharacterized protein. | 0.989 |
| PV09_00295 | PV09_09661 | A0A0D1Y302 | A0A0D2AI12 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
| PV09_00295 | PV09_09788 | A0A0D1Y302 | A0A0D1YCG4 | Uncharacterized protein. | Nudix hydrolase domain-containing protein. | 0.810 |
| PV09_01553 | PV09_05558 | A0A0D1Z3Q9 | A0A0D2A9R2 | TPR_REGION domain-containing protein. | Pex2_Pex12 domain-containing protein. | 0.991 |
| PV09_01553 | PV09_09788 | A0A0D1Z3Q9 | A0A0D1YCG4 | TPR_REGION domain-containing protein. | Nudix hydrolase domain-containing protein. | 0.657 |
| PV09_02027 | LSM4 | A0A0D2AJX1 | A0A0D1Y0T6 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.883 |
| PV09_02027 | PV09_00295 | A0A0D2AJX1 | A0A0D1Y302 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | Uncharacterized protein. | 0.999 |
| PV09_02027 | PV09_04436 | A0A0D2AJX1 | A0A0D1YVH4 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX. | 0.732 |
| PV09_02027 | PV09_06760 | A0A0D2AJX1 | A0A0D2ARW4 | 5'-3' exoribonuclease 1; Multifunctional protein that exhibits several independent functions at different levels of the cellular processes. 5'-3' exonuclease component of the nonsense-mediated mRNA decay (NMD) which is a highly conserved mRNA degradation pathway, an RNA surveillance system whose role is to identify and rid cells of mRNA with premature termination codons and thus prevents accumulation of potentially harmful truncated proteins. | PAT1 domain-containing protein. | 0.963 |
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