PV09_09237 protein (Verruconis gallopava) - STRING interaction network

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second shell of interactors

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a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

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[Homology]

Score

PV09_09237

FYVE-type domain-containing protein. (678 aa)

Predicted Functional Partners:

PV09_07755

0.991

PV09_00806

0.983

PV09_02116

0.934

PV09_00943

0.934

PV09_02933

0.934

PV09_00910

0.874

PV09_07969

0.798

PV09_08875

0.798

PV09_04242

0.798

PV09_04266

0.792

Your Current Organism:

Verruconis gallopava

NCBI taxonomy Id: 253628
Other names: ATCC 16027, CBS 437.64, CDC 45-492-62, Dactylaria gallopava, MUCL 6683, Ochroconis gallopava, Scolecobasidium gallopavum, V. gallopava, Verruconis gallopava (W.B. Cooke) Samerpitak & de Hoog, 2014

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV09_00806	PV09_00943	A0A0D1Z7E1	A0A0D1Z4X6	Uncharacterized protein.	Uncharacterized protein.	0.740
PV09_00806	PV09_02116	A0A0D1Z7E1	A0A0D1XWT1	Uncharacterized protein.	GTP-binding protein ypt5.	0.734
PV09_00806	PV09_02933	A0A0D1Z7E1	A0A0D2AI17	Uncharacterized protein.	Uncharacterized protein.	0.732
PV09_00806	PV09_04266	A0A0D1Z7E1	A0A0D2ADJ7	Uncharacterized protein.	Uncharacterized protein.	0.595
PV09_00806	PV09_09237	A0A0D1Z7E1	A0A0D1YEE9	Uncharacterized protein.	FYVE-type domain-containing protein.	0.983
PV09_00910	PV09_09237	A0A0D2BCE7	A0A0D1YEE9	Ion_trans domain-containing protein.	FYVE-type domain-containing protein.	0.874
PV09_00943	PV09_00806	A0A0D1Z4X6	A0A0D1Z7E1	Uncharacterized protein.	Uncharacterized protein.	0.740
PV09_00943	PV09_04242	A0A0D1Z4X6	A0A0D2AC98	Uncharacterized protein.	Uncharacterized protein.	0.448
PV09_00943	PV09_07755	A0A0D1Z4X6	A0A0D2A312	Uncharacterized protein.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.805
PV09_00943	PV09_07969	A0A0D1Z4X6	A0A0D1XE44	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.448
PV09_00943	PV09_08875	A0A0D1Z4X6	A0A0D1YFB3	Uncharacterized protein.	N-acetyltransferase domain-containing protein.	0.448
PV09_00943	PV09_09237	A0A0D1Z4X6	A0A0D1YEE9	Uncharacterized protein.	FYVE-type domain-containing protein.	0.934
PV09_02116	PV09_00806	A0A0D1XWT1	A0A0D1Z7E1	GTP-binding protein ypt5.	Uncharacterized protein.	0.734
PV09_02116	PV09_02933	A0A0D1XWT1	A0A0D2AI17	GTP-binding protein ypt5.	Uncharacterized protein.	0.791
PV09_02116	PV09_04242	A0A0D1XWT1	A0A0D2AC98	GTP-binding protein ypt5.	Uncharacterized protein.	0.448
PV09_02116	PV09_07755	A0A0D1XWT1	A0A0D2A312	GTP-binding protein ypt5.	Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.	0.805
PV09_02116	PV09_07969	A0A0D1XWT1	A0A0D1XE44	GTP-binding protein ypt5.	N-acetyltransferase domain-containing protein.	0.448
PV09_02116	PV09_08875	A0A0D1XWT1	A0A0D1YFB3	GTP-binding protein ypt5.	N-acetyltransferase domain-containing protein.	0.448
PV09_02116	PV09_09237	A0A0D1XWT1	A0A0D1YEE9	GTP-binding protein ypt5.	FYVE-type domain-containing protein.	0.934
PV09_02933	PV09_00806	A0A0D2AI17	A0A0D1Z7E1	Uncharacterized protein.	Uncharacterized protein.	0.732

page 1 of 4

Network Stats

number of nodes:

11

number of edges:

47

average node degree:

8.55

avg. local clustering coefficient:

0.939

expected number of edges:

14

PPI enrichment p-value:

3.83e-12

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0140647

P450-containing electron transport chain

2 of 2

3.09

1.07

0.0118

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:12480

Mixed, incl. Protein phosphopantetheinylation, and ChREBP activates metabolic gene expression

2 of 7

2.55

0.85

0.0291

CL:11780

Deoxyribose phosphate biosynthetic process, and Serine hydrolase (FSH1)

2 of 6

2.62

0.85

0.0291

CL:13194

Mitochondrial iron-sulfur cluster biogenesis, and BolA protein

2 of 21

2.07

0.73

0.0435

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00670

One carbon pool by folate

2 of 26

1.98

1.02

0.0110

map00190

Oxidative phosphorylation

3 of 119

1.49

0.96

0.0082

map00790

Folate biosynthesis

2 of 48

1.71

0.8

0.0266

map00860

Porphyrin and chlorophyll metabolism

2 of 52

1.68

0.79

0.0266

map01100

Metabolic pathways

11 of 2492

0.74

0.73

1.17e-06

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-196849

Metabolism of water-soluble vitamins and cofactors

4 of 82

1.78

1.7

0.00022

MAP-2395516

Electron transport from NADPH to Ferredoxin

2 of 3

2.92

1.63

0.0011

MAP-196854

Metabolism of vitamins and cofactors

4 of 116

1.63

1.5

0.00041

MAP-163765

ChREBP activates metabolic gene expression

2 of 9

2.44

1.25

0.0050

MAP-1362409

Mitochondrial iron-sulfur cluster biogenesis

2 of 12

2.31

1.16

0.0070

(more ...)

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